Basic Information
Locus ID:
BniB05g002470.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
octanoyl transferase activity (acting on glycine-cleavage complex H protein)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B5 | 1418005 | 1418778 | + | BniB05g002470.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.03 | 30,156.83 Da | 54.14 | 69.11 | -0.56 |
Protein Domain:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G60560.1 | F-box and associated interaction domains-containing protein. | 0 |
| RefSeq | XP_018465849.1 | PREDICTED: putative F-box protein At1g32140 [Raphanus sativus] | 0 |
| Q9FKJ1 | Putative F-box protein At5g60560 OS=Arabidopsis thaliana OX=3702 GN=At5g60560 PE=4 SV=1 | 0 | |
| TrEMBL | A0A6J0M1A7 | putative F-box protein At1g32140 OS=Raphanus sativus OX=3726 GN=LOC108837287 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Arabidopsis thaliana | 24 | AT1G24800.1, AT1G24881.1, AT1G25055.1, AT1G25150.1 ... |
| Brassicaceae | Eutrema salsugineum | 15 | Thhalv10000447m.g.v1.0, Thhalv10002786m.g.v1.0 ... |
| Brassicaceae | Schrenkiella parvula | 2 | Sp3g11150.v2.2, Sp3g32750.v2.2 |
| Brassicaceae | Brassica nigra | 13 | BniB01g039260.2N, BniB02g015480.2N, BniB04g007550.2N ... |