Basic Information
Locus ID:
BniB05g001370.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
btb and taz domain protein 5
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B5 | 769412 | 770838 | + | BniB05g001370.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.09 | 42,573.89 Da | 55.61 | 83.92 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18313 | BTB_POZ_BT | 61 | 162 | 2.57766E-58 | - |
| CDD | cd14733 | BACK | 164 | 207 | 2.69365E-5 | - |
| Pfam | PF00651 | BTB/POZ domain | 54 | 160 | 7.9E-11 | IPR000210 |
| Pfam | PF02135 | TAZ zinc finger | 247 | 330 | 3.7E-12 | IPR000197 |
| SUPERFAMILY | SSF57933 | TAZ domain | 241 | 339 | 1.83E-20 | IPR035898 |
| SUPERFAMILY | SSF54695 | POZ domain | 44 | 156 | 6.04E-13 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 31 | 163 | 2.0E-17 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 164 | 235 | 7.2E-12 | - |
| Gene3D | G3DSA:1.20.1020.10 | TAZ domain | 236 | 358 | 1.0E-19 | IPR035898 |
| SMART | SM00225 | BTB_4 | 62 | 162 | 7.0E-10 | IPR000210 |
| SMART | SM00551 | TAZ_2 | 239 | 331 | 2.4E-39 | IPR000197 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 62 | 130 | 10.819732 | IPR000210 |
| ProSiteProfiles | PS50134 | Zinc finger TAZ-type profile. | 232 | 333 | 8.653922 | IPR000197 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 12 | 26 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 32 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G37610.1 | BTB and TAZ domain protein 5. BTB and TAZ domain protein. Located in cytoplasm and expressed in fruit, flower and leaves. | 0 |
| RefSeq | XP_013619798.1 | PREDICTED: BTB/POZ and TAZ domain-containing protein 5-like [Brassica oleracea var. oleracea] | 0 |
| Q6EJ98 | BTB/POZ and TAZ domain-containing protein 5 OS=Arabidopsis thaliana OX=3702 GN=BT5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0D3A174 | BTB domain-containing protein OS=Brassica oleracea var. oleracea OX=109376 GN=106326341 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology