Basic Information
Locus ID:
BniB05g000860.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B5 | 461653 | 465163 | - | BniB05g000860.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.80 | 64,111.59 Da | 47.32 | 86.66 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 286 | 529 | 1.39054E-141 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 280 | 529 | 9.1E-75 | IPR001245 |
| Pfam | PF01842 | ACT domain | 170 | 216 | 3.0E-7 | IPR002912 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 266 | 529 | 2.0E-86 | IPR011009 |
| SUPERFAMILY | SSF55021 | ACT-like | 167 | 241 | 3.41E-12 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 358 | 550 | 4.0E-64 | - |
| Gene3D | G3DSA:3.30.70.260 | - | 170 | 243 | 1.4E-7 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 270 | 357 | 1.1E-29 | - |
| SMART | SM00220 | serkin_6 | 280 | 533 | 1.3E-68 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 280 | 532 | 46.265541 | IPR000719 |
| ProSiteProfiles | PS51671 | ACT domain profile. | 170 | 244 | 14.524479 | IPR002912 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 397 | 409 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 456 | 478 | 2.9E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 437 | 447 | 2.9E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 391 | 409 | 2.9E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 354 | 367 | 2.9E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 500 | 522 | 2.9E-16 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 535 | 566 | - | - |
| Coils | Coil | Coil | 522 | 546 | - | - |
| Coils | Coil | Coil | 220 | 240 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G38470.1 | ACT-like protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_018470924.1 | PREDICTED: serine/threonine-protein kinase STY46-like [Raphanus sativus] | 0 |
| F4JTP5 | Serine/threonine-protein kinase STY46 OS=Arabidopsis thaliana OX=3702 GN=STY46 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7P4R5 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_093970 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology