Basic Information
Locus ID:
BniB04g062320.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
serine threonine protein kinase IREH1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B4 | 53255151 | 53264763 | + | BniB04g062320.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.84 | 140,801.91 Da | 46.99 | 82.19 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05579 | STKc_MAST_like | 816 | 1095 | 9.04119E-165 | - |
| Pfam | PF00069 | Protein kinase domain | 810 | 1090 | 8.9E-65 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 795 | 1131 | 2.4E-88 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 890 | 1107 | 1.6E-106 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 807 | 1133 | 1.6E-106 | - |
| SMART | SM00220 | serkin_6 | 810 | 1090 | 4.7E-100 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 810 | 1090 | 51.21244 | IPR000719 |
| ProSiteProfiles | PS51285 | AGC-kinase C-terminal domain profile. | 1091 | 1188 | 11.29274 | IPR000961 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 929 | 941 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 45 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 132 | 161 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 304 | 321 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 304 | 332 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 26 | 45 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1122 | 1145 | - | - |
| Coils | Coil | Coil | 374 | 412 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G48490.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_013590747.1 | PREDICTED: probable serine/threonine protein kinase IRE3 [Brassica oleracea var. oleracea] | 0 |
| F4HYG2 | Probable serine/threonine protein kinase IRE3 OS=Arabidopsis thaliana OX=3702 GN=IRE3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8X7SF48 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_033749 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology