Basic Information
Locus ID:
BniB04g058380.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
leucine-rich repeat protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B4 | 50166979 | 50168141 | - | BniB04g058380.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.15 | 15,154.38 Da | 35.44 | 87.91 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 10 | 115 | 2.2E-9 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 20 | 107 | 5.2E-13 | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G51620.2 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_013640748.1 | LRR receptor-like serine/threonine-protein kinase IOS1 [Brassica napus] | 0 |
| Q9ZQR3 | Leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14510 OS=Arabidopsis thaliana OX=3702 GN=At2g14510 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7SFA9 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_033613 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Arabidopsis thaliana | 1 | AT1G51620.2 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10011641m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp1g38260.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB04g058380.2N, BniB06g029140.2N |