Basic Information
Locus ID:
BniB04g057350.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
PTI1-like tyrosine-protein kinase At3g15890
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B4 | 49346839 | 49348118 | + | BniB04g057350.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.73 | 37,823.83 Da | 38.63 | 80.45 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 47 | 309 | 5.46796E-96 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 43 | 307 | 2.9E-43 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 21 | 307 | 4.32E-69 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 10 | 117 | 8.5E-32 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 118 | 321 | 2.2E-53 | - |
| PIRSF | PIRSF000654 | ILK | 9 | 317 | 2.3E-34 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 41 | 318 | 33.728683 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 47 | 69 | - | IPR017441 |
| ProSitePatterns | PS00109 | Tyrosine protein kinases specific active-site signature. | 161 | 173 | - | IPR008266 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G52540.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_018480677.1 | PREDICTED: PTI1-like tyrosine-protein kinase At3g15890 [Raphanus sativus] | 0 |
| Q9LSC2 | PTI1-like tyrosine-protein kinase At3g15890 OS=Arabidopsis thaliana OX=3702 GN=At3g15890 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6J0N7L5 | PTI1-like tyrosine-protein kinase At3g15890 OS=Raphanus sativus OX=3726 GN=LOC108851713 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology