Basic Information
Locus ID:
BniB04g055450.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Mitogen-Activated Protein Kinase Kinase Kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B4 | 47424401 | 47424889 | - | BniB04g055450.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.05 | 9,845.06 Da | 43.60 | 87.89 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 22 | 73 | 1.28E-11 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 6 | 78 | 1.4E-11 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 68 | 8.852844 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 69 | 90 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G08500.1 | MAPK/ERK kinase kinase 1. Encodes a member of the A1 subgroup of the MEKK (MAPK/ERK kinase kinase) family. MEKK is another name for Mitogen-Activated Protein Kinase Kinase Kinase (MAPKKK or MAP3K). This subgroup has four members: At4g08500 (MEKK1, also known as ARAKIN, MAP3Kb1, MAPKKK8), At4g08480 (MEKK2, also known as MAP3Kb4, MAPKKK9), At4g08470 (MEKK3, also known as MAP3Kb3, MAPKKK10) and At4g12020 (MEKK4, also known as MAP3Kb5, MAPKKK11, WRKY19). Nomenclatures for mitogen-activated protein kinases are described in Trends in Plant Science 2002, 7(7):301. Mediates cold, salt, cadmium and wounding stress signalling. Phosphorylates MEK1. | 0 |
| RefSeq | XP_033128361.1 | mitogen-activated protein kinase kinase kinase 1 isoform X3 [Brassica rapa] | 0 |
| Q39008 | Mitogen-activated protein kinase kinase kinase 1 OS=Arabidopsis thaliana OX=3702 GN=MEKK1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A3P5YUN3 | (field mustard) hypothetical protein OS=Brassica campestris OX=3711 GN=BRAA06T23310Z PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Brassica nigra | 1 | BniB04g055450.2N |
| Poaceae | Echinochloa crus-galli | 3 | AH07.3625, BH07.3436, CH07.3506 |
| Poaceae | Oryza coarctata | 1 | Oco03G022830 |
| Poaceae | Oryza sativa | 1 | LOC_Os02g53030.1 |