Basic Information
Locus ID:
BniB04g053200.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Phosphatidylinositol-4-phosphate 5-Kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B4 | 43575585 | 43581470 | - | BniB04g053200.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.11 | 163,347.33 Da | 41.69 | 81.55 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17300 | PIPKc_PIKfyve | 1170 | 1432 | 8.89124E-132 | IPR044769 |
| CDD | cd03334 | Fab1_TCP | 164 | 427 | 1.82183E-102 | - |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 182 | 423 | 2.5E-21 | IPR002423 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1209 | 1376 | 8.8E-37 | IPR002498 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1379 | 1430 | 3.4E-7 | IPR002498 |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 226 | 394 | 5.23E-25 | IPR027409 |
| SUPERFAMILY | SSF54849 | GroEL-intermediate domain like | 182 | 417 | 3.66E-7 | IPR027410 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1169 | 1432 | 4.32E-75 | - |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 225 | 394 | 1.4E-32 | IPR027409 |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1122 | 1290 | 1.2E-34 | IPR027484 |
| Gene3D | G3DSA:3.30.810.10 | - | 1292 | 1433 | 1.6E-40 | - |
| SMART | SM00330 | PIPK_2 | 1140 | 1433 | 5.2E-88 | IPR002498 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1109 | 1432 | 55.941906 | IPR002498 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 101 | 120 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 547 | 564 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 148 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 71 | 93 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 965 | 979 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 956 | 979 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 542 | 585 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 904 | 944 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 917 | 941 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 24 | 64 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G34260.1 | FORMS APLOID AND BINUCLEATE CELLS 1A. Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the porposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown. | 0 |
| RefSeq | XP_009114746.1 | putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D [Brassica rapa] | 0 |
| Q9XID0 | Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D OS=Arabidopsis thaliana OX=3702 GN=FAB1D PE=3 SV=1 | 0 | |
| TrEMBL | A0A8X7V973 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_033142 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology