Basic Information
Locus ID:
BniB04g046170.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B4 | 26357790 | 26361245 | + | BniB04g046170.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.20 | 64,858.37 Da | 45.54 | 73.04 | -0.75 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05599 | STKc_NDR_like | 115 | 484 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 119 | 420 | 7.1E-65 | IPR000719 |
| Pfam | PF00433 | Protein kinase C terminal domain | 439 | 483 | 3.9E-5 | IPR017892 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 101 | 472 | 2.02E-88 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 108 | 203 | 9.6E-37 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 204 | 437 | 4.5E-70 | - |
| SMART | SM00133 | pkinase_C_6 | 421 | 485 | 7.5E-9 | IPR000961 |
| SMART | SM00220 | serkin_6 | 117 | 420 | 9.1E-106 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 117 | 420 | 48.060558 | IPR000719 |
| ProSiteProfiles | PS51285 | AGC-kinase C-terminal domain profile. | 421 | 493 | 13.926411 | IPR000961 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 123 | 146 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 236 | 248 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 48 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 502 | 562 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 284 | 304 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 518 | 562 | - | - |
| Coils | Coil | Coil | 56 | 83 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G30640.1 | Protein kinase family protein. | 0 |
| RefSeq | XP_018510608.1 | serine/threonine-protein kinase tricorner isoform X1 [Brassica rapa] | 0 |
| Q6TGC6 | Serine/threonine-protein kinase CBK1 OS=Pneumocystis carinii OX=4754 GN=CBK1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8X7V6J6 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_032703 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology