Basic Information
Locus ID:
BniB04g043230.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B4 | 24179571 | 24182758 | + | BniB04g043230.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.13 | 108,824.19 Da | 37.12 | 102.25 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 678 | 909 | 9.4E-41 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 134 | 191 | 8.1E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 17 | 55 | 1.7E-9 | IPR013210 |
| SUPERFAMILY | SSF52047 | RNI-like | 233 | 592 | 1.1E-58 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 668 | 961 | 8.23E-72 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 23 | 361 | 4.76E-60 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 15 | 193 | 6.9E-49 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 194 | 300 | 3.3E-30 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 768 | 986 | 1.0E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 301 | 609 | 1.7E-79 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 660 | 767 | 3.2E-23 | - |
| SMART | SM00220 | serkin_6 | 676 | 946 | 6.0E-31 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 676 | 963 | 35.4813 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 682 | 704 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 812 | 824 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 964 | 994 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 964 | 982 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G28440.1 | HAESA-like 1. | 0 |
| RefSeq | XP_009113661.1 | receptor-like protein kinase HSL1 [Brassica rapa] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7V6B5 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_032463 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology