Basic Information
Locus ID:
BniB04g040330.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Belongs to the 14-3-3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B4 | 22003995 | 22005194 | + | BniB04g040330.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.80 | 30,300.47 Da | 48.33 | 74.51 | -0.71 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00244 | 14-3-3 protein | 15 | 237 | 1.6E-107 | IPR023410 |
| SUPERFAMILY | SSF48445 | 14-3-3 protein | 8 | 239 | 4.58E-106 | IPR036815 |
| Gene3D | G3DSA:1.20.190.20 | - | 1 | 251 | 1.1E-131 | IPR036815 |
| SMART | SM00101 | 1433_4 | 9 | 250 | 1.7E-171 | IPR023410 |
| PIRSF | PIRSF000868 | 14-3-3 | 3 | 255 | 8.6E-121 | IPR000308 |
| ProSitePatterns | PS00797 | 14-3-3 proteins signature 2. | 219 | 238 | - | IPR023409 |
| ProSitePatterns | PS00796 | 14-3-3 proteins signature 1. | 47 | 57 | - | IPR023409 |
| PRINTS | PR00305 | 14-3-3 protein zeta signature | 41 | 70 | 1.0E-82 | IPR000308 |
| PRINTS | PR00305 | 14-3-3 protein zeta signature | 121 | 143 | 1.0E-82 | IPR000308 |
| PRINTS | PR00305 | 14-3-3 protein zeta signature | 156 | 182 | 1.0E-82 | IPR000308 |
| PRINTS | PR00305 | 14-3-3 protein zeta signature | 210 | 239 | 1.0E-82 | IPR000308 |
| PRINTS | PR00305 | 14-3-3 protein zeta signature | 90 | 114 | 1.0E-82 | IPR000308 |
| PRINTS | PR00305 | 14-3-3 protein zeta signature | 183 | 209 | 1.0E-82 | IPR000308 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 238 | 266 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 243 | 266 | - | - |
| Coils | Coil | Coil | 197 | 217 | - | - |
| Coils | Coil | Coil | 15 | 35 | - | - |
KEGG Pathway
KO Term:
Pathway:
ko04011 (MAPK signaling pathway - yeast)
map04011 (MAPK signaling pathway - yeast)
ko04110 (Cell cycle)
map04110 (Cell cycle)
ko04114 (Oocyte meiosis)
map04114 (Oocyte meiosis)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04390 (Hippo signaling pathway)
map04390 (Hippo signaling pathway)
ko04391 (Hippo signaling pathway - fly)
map04391 (Hippo signaling pathway - fly)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G26480.1 | general regulatory factor 12. 14-3-3 protein GF14iota (grf12) | 0 |
| RefSeq | XP_009115367.1 | 14-3-3-like protein GF14 iota [Brassica rapa] | 0 |
| Q9C5W6 | 14-3-3-like protein GF14 iota OS=Arabidopsis thaliana OX=3702 GN=GRF12 PE=2 SV=1 | 0 | |
| TrEMBL | M4E7F8 | 14_3_3 domain-containing protein OS=Brassica rapa subsp. pekinensis OX=51351 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology