Basic Information
Locus ID:
BniB04g039660.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Domain of unknown function (DUF569)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B4 | 21540778 | 21544051 | + | BniB04g039660.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.84 | 57,995.34 Da | 49.07 | 66.14 | -0.71 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04601 | Domain of unknown function (DUF569) | 236 | 377 | 5.5E-73 | IPR007679 |
| Pfam | PF04601 | Domain of unknown function (DUF569) | 1 | 144 | 8.1E-75 | IPR007679 |
| SUPERFAMILY | SSF50405 | Actin-crosslinking proteins | 240 | 381 | 2.29E-25 | IPR008999 |
| SUPERFAMILY | SSF50405 | Actin-crosslinking proteins | 5 | 145 | 6.15E-21 | IPR008999 |
| Gene3D | G3DSA:2.80.10.50 | - | 244 | 373 | 5.4E-18 | - |
| Gene3D | G3DSA:2.80.10.50 | - | 7 | 144 | 1.6E-15 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 392 | 436 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 418 | 432 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 208 | 227 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 399 | 413 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G27100.1 | Actin cross-linking protein. | 0 |
| RefSeq | XP_018438269.1 | PREDICTED: uncharacterized protein LOC108810658 [Raphanus sativus] | 0 |
| TrEMBL | A0A8X7V658 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_032385 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology