Basic Information
Locus ID:
BniB04g037220.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
May serve as docking site to facilitate the association of other proteins to the plasma membrane
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B4 | 19847338 | 19848351 | + | BniB04g037220.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.58 | 13,201.22 Da | 54.41 | 91.69 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01814 | Ubl_MUBs_plant | 7 | 94 | 7.29213E-48 | - |
| Pfam | PF13881 | Ubiquitin-2 like Rad60 SUMO-like | 5 | 116 | 5.9E-43 | IPR039540 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 3 | 95 | 4.28E-28 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 100 | 4.3E-41 | - |
| PIRSF | PIRSF032572 | MUB | 1 | 118 | 1.1E-50 | IPR017000 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 7 | 75 | 10.266311 | IPR000626 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G22050.1 | membrane-anchored ubiquitin-fold protein 6 precursor. | 0 |
| RefSeq | XP_013748579.1 | membrane-anchored ubiquitin-fold protein 6 [Brassica napus] | 0 |
| Q8GWJ6 | Membrane-anchored ubiquitin-fold protein 6 OS=Arabidopsis thaliana OX=3702 GN=MUB6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7V636 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_032223 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology