Basic Information
Locus ID:
BniB04g036360.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B4 | 19392999 | 19396064 | - | BniB04g036360.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.44 | 81,935.46 Da | 45.34 | 84.32 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00293 | USP_Like | 23 | 137 | 1.27536E-6 | - |
| Pfam | PF00582 | Universal stress protein family | 17 | 144 | 6.8E-6 | IPR006016 |
| Pfam | PF00069 | Protein kinase domain | 399 | 661 | 8.7E-44 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 375 | 666 | 2.83E-76 | IPR011009 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 16 | 144 | 5.34E-5 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 470 | 690 | 1.6E-56 | - |
| Gene3D | G3DSA:3.40.50.12370 | - | 17 | 226 | 1.1E-6 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 366 | 469 | 2.7E-29 | - |
| SMART | SM00220 | serkin_6 | 395 | 673 | 1.2E-34 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 395 | 673 | 38.195026 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 401 | 423 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 516 | 528 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 197 | 212 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 185 | 216 | - | - |
| Coils | Coil | Coil | 187 | 207 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21590.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_013642347.2 | protein kinase STUNTED [Brassica napus] | 0 |
| B5X4Z9 | Protein kinase STUNTED OS=Arabidopsis thaliana OX=3702 GN=STU PE=2 SV=1 | 0 | |
| TrEMBL | A0A078F554 | (rape) hypothetical protein OS=Brassica napus OX=3708 GN=BnaA06g15320D PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology