halophFGD

Basic Information

Locus ID: BniB04g033510.2N

Species & Taxonomic ID: Brassica nigra & 3710

Genome Assembly: N100

Short Name: CPK30

Description: Calcium-dependent protein kinase

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
B4	17812149	17812704	-	BniB04g033510.2N

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.13	17,849.33 Da	26.64	87.73	-0.23

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd00051	EFh	3	57	9.33198E-14	IPR002048
Pfam	PF13499	EF-hand domain pair	4	57	2.1E-9	IPR002048
SUPERFAMILY	SSF47473	EF-hand	2	83	9.22E-16	IPR011992
Gene3D	G3DSA:1.10.238.10	-	1	124	1.8E-17	-
SMART	SM00054	efh_1	31	59	1.2E-6	IPR002048
ProSiteProfiles	PS50222	EF-hand calcium-binding domain profile.	27	62	13.118635	IPR002048
ProSitePatterns	PS00018	EF-hand calcium-binding domain.	40	52	-	IPR018247

Gene Ontology

Molecular Function:

GO:0005509 (calcium ion binding)

KEGG Pathway

KO Term:

K13412 (calcium-dependent protein kinase [EC:2.7.11.1])

Pathway:

ko04626 (Plant-pathogen interaction) map04626 (Plant-pathogen interaction)

Best hit

Source	Best Hit ID	Description
TAIR	AT1G18890.1	calcium-dependent protein kinase 1. encodes a calcium-dependent protein kinase whose gene expression is induced by dehydration and high salt. Kinase activity could not be detected in vitro.
RefSeq	XP_033130082.1	calcium-dependent protein kinase 10 [Brassica rapa]
Swiss-Prot	Q9M9V8	Calcium-dependent protein kinase 10 OS=Arabidopsis thaliana OX=3702 GN=CPK10 PE=1 SV=1
TrEMBL	A0A8S9MKS5	EF-hand domain-containing protein OS=Brassica cretica OX=69181 GN=F2Q68_00042174 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	10	jg13090, jg14776, jg15919, jg18650, jg31322, jg3256, jg37725 ... jg4348, jg5914, jg8555
Aizoaceae	Mesembryanthemum crystallinum	4	gene_15860, gene_19595, gene_2258, gene_4663
Amaranthaceae	Atriplex hortensis	5	Ah001003, Ah003384, Ah005001, Ah019346, Ah021788
Amaranthaceae	Beta vulgaris	4	BVRB_3g054920, BVRB_4g072770, BVRB_5g102740, BVRB_5g115380
Amaranthaceae	Salicornia bigelovii	10	Sbi_jg15245, Sbi_jg18008, Sbi_jg30414, Sbi_jg4736 ... Sbi_jg56056, Sbi_jg58840, Sbi_jg59303, Sbi_jg62630, Sbi_jg63321, Sbi_jg7338
Amaranthaceae	Salicornia europaea	5	Seu_jg1218, Seu_jg12679, Seu_jg23557, Seu_jg26541 ... Seu_jg28708
Amaranthaceae	Suaeda aralocaspica	5	GOSA_00001412, GOSA_00006301, GOSA_00014406, GOSA_00015054 ... GOSA_00018393
Amaranthaceae	Suaeda glauca	10	Sgl01721, Sgl02688, Sgl06874, Sgl07845, Sgl23841, Sgl29011 ... Sgl51120, Sgl51710, Sgl56428, Sgl57017
Amaranthaceae	Chenopodium album	14	gene:ENSEOMG00000004853, gene:ENSEOMG00000012271 ... gene:ENSEOMG00000013063, gene:ENSEOMG00000014305, gene:ENSEOMG00000021058, gene:ENSEOMG00000022332, gene:ENSEOMG00000023620, gene:ENSEOMG00000023673, gene:ENSEOMG00000026916, gene:ENSEOMG00000029775, gene:ENSEOMG00000032258, gene:ENSEOMG00000042399, gene:ENSEOMG00000044321, gene:ENSEOMG00000045358
Amaranthaceae	Chenopodium quinoa	9	CQ.Regalona.r1.3AG0009610, CQ.Regalona.r1.3AG0020940 ... CQ.Regalona.r1.3BG0009760, CQ.Regalona.r1.3BG0021730, CQ.Regalona.r1.4BG0001680, CQ.Regalona.r1.5AG0010390, CQ.Regalona.r1.5AG0021440, CQ.Regalona.r1.5BG0010930, CQ.Regalona.r1.5BG0022820
Anacardiaceae	Pistacia vera	5	pistato.v30053120, pistato.v30137890, pistato.v30186810 ... pistato.v30243710, pistato.v30267100
Apiaceae	Apium graveolens	5	Ag10G00932, Ag10G02360, Ag2G01104, Ag3G01428, Ag9G01448
Arecaceae	Cocos nucifera	7	COCNU_01G015330, COCNU_04G003230, COCNU_06G014620 ... COCNU_12G006860, COCNU_14G012130, COCNU_14G012770, scaffold004647G000050
Arecaceae	Phoenix dactylifera	10	gene-LOC103696783, gene-LOC103704560, gene-LOC103711620 ... gene-LOC103712050, gene-LOC103717807, gene-LOC103718118, gene-LOC103718329, gene-LOC103722163, gene-LOC103722265, gene-LOC120106531
Asparagaceae	Asparagus officinalis	7	AsparagusV1_03.1493.V1.1, AsparagusV1_03.2544.V1.1 ... AsparagusV1_05.1889.V1.1, AsparagusV1_07.469.V1.1, AsparagusV1_08.994.V1.1, AsparagusV1_09.480.V1.1, AsparagusV1_10.1371.V1.1
Asteraceae	Flaveria trinervia	11	Ftri10G18117, Ftri11G07758, Ftri11G23072, Ftri12G23303 ... Ftri14G32727, Ftri15G22694, Ftri18G09157, Ftri1G08574, Ftri2G04616, Ftri2G16778, Ftri9G05496
Brassicaceae	Arabidopsis thaliana	8	AT1G18890.1, AT1G74740.1, AT2G31500.1, AT2G41860.1 ... AT3G51850.1, AT3G57530.1, AT5G12480.1, AT5G19450.1
Brassicaceae	Eutrema salsugineum	8	Thhalv10005884m.g.v1.0, Thhalv10007293m.g.v1.0 ... Thhalv10010284m.g.v1.0, Thhalv10013170m.g.v1.0, Thhalv10013210m.g.v1.0, Thhalv10016430m.g.v1.0, Thhalv10016499m.g.v1.0, Thhalv10018366m.g.v1.0
Brassicaceae	Schrenkiella parvula	8	Sp1g16870.v2.2, Sp4g13960.v2.2, Sp4g24130.v2.2 ... Sp5g05060.v2.2, Sp5g10420.v2.2, Sp5g29860.v2.2, Sp6g24960.v2.2, Sp6g31120.v2.2
Brassicaceae	Brassica nigra	18	BniB01g003840.2N, BniB01g012630.2N, BniB02g043240.2N ... BniB02g049650.2N, BniB02g074450.2N, BniB03g028330.2N, BniB03g053170.2N, BniB04g033510.2N, BniB04g033520.2N, BniB05g044260.2N, BniB06g001120.2N, BniB06g020570.2N, BniB06g055760.2N, BniB06g066830.2N, BniB08g009890.2N, BniB08g019550.2N, BniB08g065950.2N, BniB08g072260.2N
Casuarinaceae	Casuarina equisetifolia	5	Ceq04G1078, Ceq04G1833, Ceq05G1546, Ceq07G1479, Ceq08G1010
Casuarinaceae	Casuarina glauca	5	Cgl04G1225, Cgl04G2011, Cgl05G1548, Cgl07G1559, Cgl08G1032
Cymodoceaceae	Cymodocea nodosa	7	gene.Cymno01g02190, gene.Cymno01g02730, gene.Cymno03g00060 ... gene.Cymno04g02250, gene.Cymno06g11450, gene.Cymno09g06130, gene.Cymno15g07030
Hydrocharitaceae	Thalassia testudinum	6	gene.Thate01g01500, gene.Thate01g27230, gene.Thate02g20620 ... gene.Thate02g37910, gene.Thate08g14070, gene.Thate09g06370
Malvaceae	Hibiscus hamabo Siebold & Zucc.	2	nbisL1-mrna-4237, nbisL1-mrna-5852
Nitrariaceae	Nitraria sibirica	5	evm.TU.LG01.1009, evm.TU.LG01.2476, evm.TU.LG09.223 ... evm.TU.LG10.871, evm.TU.LG11.150
Plantaginaceae	Plantago ovata	6	Pov_00002741, Pov_00006658, Pov_00017106, Pov_00019058 ... Pov_00024423, Pov_00025199
Plumbaginaceae	Limonium bicolor	5	Lb1G04821, Lb3G16250, Lb3G20582, Lb4G26346, Lb5G28615
Poaceae	Echinochloa crus-galli	20	AH01.309, AH01.999, AH02.3767, AH03.2573, AH03.3437 ... AH05.2096, AH05.487, BH01.1141, BH01.414, BH02.3778, BH03.2719, BH05.2230, BH05.538, BH07.4093, CH01.1191, CH01.267, CH03.2922, CH03.3805, CH05.2315, CH05.607
Poaceae	Eleusine coracana subsp. coracana	14	gene-QOZ80_1AG0038790, gene-QOZ80_1BG0088810 ... gene-QOZ80_3AG0211430, gene-QOZ80_3AG0221040, gene-QOZ80_3BG0256560, gene-QOZ80_3BG0266200, gene-QOZ80_5AG0370170, gene-QOZ80_5AG0385740, gene-QOZ80_5BG0417690, gene-QOZ80_5BG0433000, gene-QOZ80_6AG0530080, gene-QOZ80_6BG0483990, gene-QOZ80_7AG0573230, gene-QOZ80_7BG0604530
Poaceae	Hordeum vulgare	7	HORVU.MOREX.r3.1HG0072410.1, HORVU.MOREX.r3.2HG0133550.1 ... HORVU.MOREX.r3.3HG0303750.1, HORVU.MOREX.r3.4HG0334900.1, HORVU.MOREX.r3.5HG0449270.1, HORVU.MOREX.r3.5HG0495800.1, HORVU.MOREX.r3.5HG0523860.1
Poaceae	Lolium multiflorum	10	gene-QYE76_002412, gene-QYE76_002440, gene-QYE76_014244 ... gene-QYE76_016599, gene-QYE76_040445, gene-QYE76_040488, gene-QYE76_055612, gene-QYE76_055623, gene-QYE76_060931, gene-QYE76_062566
Poaceae	Oryza coarctata	13	Oco01G024080, Oco02G024860, Oco05G020570, Oco05G026750 ... Oco06G021320, Oco06G027740, Oco09G011840, Oco10G011800, Oco13G010400, Oco14G011030, Oco18G009310, Oco23G003940, Oco24G003470
Poaceae	Oryza sativa	7	LOC_Os01g61590.1, LOC_Os03g48270.1, LOC_Os03g59390.1 ... LOC_Os05g39090.1, LOC_Os07g38120.1, LOC_Os09g33910.1, LOC_Os12g12860.1
Poaceae	Paspalum vaginatum	8	gene-BS78_01G040400, gene-BS78_01G121400, gene-BS78_K288900 ... gene-BS78_02G240000, gene-BS78_02G319900, gene-BS78_03G325600, gene-BS78_08G065300, gene-BS78_09G172000
Poaceae	Puccinellia tenuiflora	10	Pt_Chr0104935, Pt_Chr0104943, Pt_Chr0105691, Pt_Chr0304471 ... Pt_Chr0304473, Pt_Chr0502005, Pt_Chr0601925, Pt_Chr0701253, Pt_Chr0701316, Pt_Chr0703399
Poaceae	Sporobolus alterniflorus	19	Chr01G018820, Chr02G005550, Chr04G024010, Chr04G026060 ... Chr04G030990, Chr05G027830, Chr06G026370, Chr07G024970, Chr07G030030, Chr12G033870, Chr14G011260, Chr18G011580, Chr19G004060, Chr19G013770, Chr21G011420, Chr24G010470, Chr27G002070, Chr27G013210, Chr28G009740
Poaceae	Thinopyrum elongatum	6	Tel1E01G473300, Tel2E01G380800, Tel3E01G563600 ... Tel4E01G058500, Tel5E01G214900, Tel5E01G732900
Poaceae	Triticum dicoccoides	15	gene_TRIDC1AG043530, gene_TRIDC1BG049390 ... gene_TRIDC2AG025680, gene_TRIDC2BG030100, gene_TRIDC3AG050600, gene_TRIDC3BG056980, gene_TRIDC4AG043860, gene_TRIDC4BG004990, gene_TRIDC4BG005020, gene_TRIDC5AG020280, gene_TRIDC5AG044610, gene_TRIDC5AG066400, gene_TRIDC5BG018800, gene_TRIDC5BG048480, gene_TRIDC5BG071320
Poaceae	Triticum aestivum	20	TraesCS1A02G292200.1, TraesCS1B02G301600.1 ... TraesCS1D02G290700.1, TraesCS2A02G199700.1, TraesCS2B02G227000.1, TraesCS2D02G207400.1, TraesCS3A02G351300.1, TraesCS3B02G383800.1, TraesCS3D02G345500.1, TraesCS4A02G283400.1, TraesCS4B02G030100.1, TraesCS4D02G027600.1, TraesCS5A02G118200.1, TraesCS5A02G298500.1, TraesCS5A02G463100.2, TraesCS5B02G112900.1, TraesCS5B02G297700.1, TraesCS5B02G474500.1, TraesCS5D02G305200.1, TraesCS5D02G475900.1
Poaceae	Zea mays	16	Zm00001eb006990_P001, Zm00001eb016910_P001 ... Zm00001eb032840_P001, Zm00001eb061860_P001, Zm00001eb102690_P001, Zm00001eb107190_P001, Zm00001eb133780_P005, Zm00001eb212430_P001, Zm00001eb217170_P001, Zm00001eb289970_P001, Zm00001eb318330_P001, Zm00001eb324690_P001, Zm00001eb361020_P001, Zm00001eb368360_P001, Zm00001eb411450_P001, Zm00001eb439810_P001
Poaceae	Zoysia japonica	6	nbis-gene-10573, nbis-gene-11508, nbis-gene-15782 ... nbis-gene-24180, nbis-gene-52041, nbis-gene-651
Poaceae	Zoysia macrostachya	10	Zma_g221, Zma_g24901, Zma_g2526, Zma_g27035, Zma_g28408 ... Zma_g30100, Zma_g3046, Zma_g5381, Zma_g6686, Zma_g8935
Portulacaceae	Portulaca oleracea	17	evm.TU.LG02.844, evm.TU.LG04.2869, evm.TU.LG05.1391 ... evm.TU.LG07.1491, evm.TU.LG07.502, evm.TU.LG09.2018, evm.TU.LG10.511, evm.TU.LG11.1273, evm.TU.LG15.437, evm.TU.LG16.768, evm.TU.LG17.519, evm.TU.LG18.1756, evm.TU.LG18.1757, evm.TU.LG20.141, evm.TU.LG20.142, evm.TU.LG21.822, evm.TU.LG22.652
Posidoniaceae	Posidonia oceanica	6	gene.Posoc01g05260, gene.Posoc02g03120, gene.Posoc03g04190 ... gene.Posoc03g05320, gene.Posoc04g10010, gene.Posoc07g14090
Rhizophoraceae	Bruguiera sexangula	8	evm.TU.Scaffold_11_RagTag.938, evm.TU.Scaffold_1_RagTag.1180 ... evm.TU.Scaffold_13_RagTag.1039, evm.TU.Scaffold_1_RagTag.1822, evm.TU.Scaffold_2_RagTag.1163, evm.TU.Scaffold_2_RagTag.626, evm.TU.Scaffold_3_RagTag.1471, evm.TU.Scaffold_4_RagTag.537
Rhizophoraceae	Carallia pectinifolia	8	nbisL1-mrna-14621, nbisL1-mrna-1783, nbisL1-mrna-24771 ... nbisL1-mrna-28829, nbisL1-mrna-29980, nbisL1-mrna-3804, nbisL1-mrna-4564, nbisL1-mrna-6439
Rhizophoraceae	Ceriops tagal	8	nbisL1-mrna-1383, nbisL1-mrna-15553, nbisL1-mrna-19062 ... nbisL1-mrna-20637, nbisL1-mrna-2644, nbisL1-mrna-3542, nbisL1-mrna-4431, nbisL1-mrna-8551
Rhizophoraceae	Ceriops zippeliana	7	nbisL1-mrna-12511, nbisL1-mrna-16401, nbisL1-mrna-1802 ... nbisL1-mrna-18834, nbisL1-mrna-3693, nbisL1-mrna-4246, nbisL1-mrna-9579
Rhizophoraceae	Kandelia candel	8	evm.TU.utg000008l.345, evm.TU.utg000009l.1015 ... evm.TU.utg000009l.532, evm.TU.utg000010l.56, evm.TU.utg000015l.626, evm.TU.utg000016l.700, evm.TU.utg000016l.796, evm.TU.utg000019l.355
Rhizophoraceae	Kandelia obovata	7	Maker00000809, Maker00005206, Maker00005639, Maker00008926 ... Maker00015676, Maker00017261, Maker00017350
Rhizophoraceae	Rhizophora apiculata	8	nbisL1-mrna-10980, nbisL1-mrna-12436, nbisL1-mrna-14560 ... nbisL1-mrna-15784, nbisL1-mrna-2683, nbisL1-mrna-4526, nbisL1-mrna-4952, nbisL1-mrna-804
Rhizophoraceae	Rhizophora mangle	9	nbisL1-mrna-12855, nbisL1-mrna-13378, nbisL1-mrna-13766 ... nbisL1-mrna-1516, nbisL1-mrna-16691, nbisL1-mrna-20760, nbisL1-mrna-4168, nbisL1-mrna-5566, nbisL1-mrna-8582
Salicaceae	Populus euphratica	10	populus_peu01939, populus_peu10969, populus_peu11440 ... populus_peu22617, populus_peu25466, populus_peu26112, populus_peu28542, populus_peu29961, populus_peu29969, populus_peu35869
Solanaceae	Lycium barbarum	8	gene-LOC132606998, gene-LOC132607492, gene-LOC132626051 ... gene-LOC132626463, gene-LOC132630800, gene-LOC132632688, gene-LOC132636529, gene-LOC132643590
Solanaceae	Solanum chilense	6	SOLCI000079100, SOLCI000301400, SOLCI003449400 ... SOLCI004958000, SOLCI006002200, SOLCI006211800
Solanaceae	Solanum pennellii	6	gene-LOC107002203, gene-LOC107002973, gene-LOC107015308 ... gene-LOC107022173, gene-LOC107023622, gene-LOC107031281
Tamaricaceae	Reaumuria soongarica	6	STRG.15475_chr06_-, gene_11928, gene_12861, gene_13202 ... gene_5137, gene_6576
Tamaricaceae	Tamarix chinensis	8	TC02G1658, TC05G0071, TC05G1914, TC05G2809, TC06G0287 ... TC06G2438, TC07G1522, TC09G1529
Zosteraceae	Zostera marina	4	Zosma03g05340.v3.1, Zosma03g21880.v3.1, Zosma04g10760.v3.1 ... Zosma06g10080.v3.1