Basic Information
Locus ID:
BniB04g031950.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
protein serine/threonine kinase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B4 | 17029909 | 17032892 | - | BniB04g031950.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.94 | 79,511.24 Da | 54.35 | 82.71 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 403 | 656 | 2.41952E-88 | - |
| CDD | cd01989 | STK_N | 14 | 151 | 2.90843E-52 | - |
| Pfam | PF00582 | Universal stress protein family | 17 | 124 | 4.8E-7 | IPR006016 |
| Pfam | PF00069 | Protein kinase domain | 400 | 654 | 2.4E-40 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 378 | 657 | 2.83E-67 | IPR011009 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 17 | 126 | 2.34E-9 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 470 | 682 | 4.5E-50 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 15 | 150 | 1.3E-9 | IPR014729 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 364 | 469 | 9.6E-25 | - |
| SMART | SM00220 | serkin_6 | 397 | 660 | 9.0E-28 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 397 | 660 | 34.760464 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 515 | 527 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 180 | 199 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 251 | 274 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 165 | 179 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 156 | 199 | - | - |
| Coils | Coil | Coil | 354 | 374 | - | - |
| Coils | Coil | Coil | 272 | 299 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G17540.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_013747287.1 | U-box domain-containing protein 35-like [Brassica napus] | 0 |
| Q9SW11 | U-box domain-containing protein 35 OS=Arabidopsis thaliana OX=3702 GN=PUB35 PE=2 SV=2 | 0 | |
| TrEMBL | A0A078IE47 | (rape) hypothetical protein OS=Brassica napus OX=3708 GN=BnaC05g13660D PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology