Basic Information
Locus ID:
BniB04g030430.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B4 | 16340976 | 16342674 | + | BniB04g030430.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.58 | 51,794.90 Da | 42.52 | 91.78 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 158 | 424 | 3.16655E-101 | - |
| Pfam | PF00069 | Protein kinase domain | 153 | 421 | 1.4E-48 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 135 | 429 | 1.48E-83 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 132 | 227 | 2.9E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 228 | 435 | 3.2E-64 | - |
| SMART | SM00220 | serkin_6 | 152 | 423 | 4.6E-41 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 152 | 429 | 38.364635 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 158 | 181 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 274 | 286 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 414 | 456 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 414 | 462 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G09440.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_018468321.1 | PREDICTED: probable receptor-like protein kinase At5g18500 [Raphanus sativus] | 0 |
| Q9SJG2 | Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana OX=3702 GN=At2g42960 PE=3 SV=1 | 0 | |
| TrEMBL | A0A6J0M9S8 | probable receptor-like protein kinase At5g18500 OS=Raphanus sativus OX=3726 GN=LOC108840005 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology