Basic Information
Locus ID:
BniB04g028500.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Leucine rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B4 | 15453633 | 15455934 | - | BniB04g028500.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.63 | 61,225.40 Da | 48.44 | 77.98 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 285 | 549 | 3.3E-34 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 262 | 551 | 2.53E-62 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 247 | 361 | 4.3E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 362 | 554 | 2.0E-46 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 284 | 555 | 32.866512 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 169 | 190 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 42 | 66 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G11130.2 | - | 0 |
| RefSeq | XP_013583496.1 | PREDICTED: protein STRUBBELIG isoform X1 [Brassica oleracea var. oleracea] | 0 |
| Q8RWZ1 | Protein STRUBBELIG OS=Arabidopsis thaliana OX=3702 GN=SUB PE=1 SV=1 | 0 | |
| TrEMBL | A0A3P5YPA7 | (field mustard) hypothetical protein OS=Brassica campestris OX=3711 GN=BRAA06T23984Z PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology