Basic Information
Locus ID:
BniB04g024110.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B4 | 12971851 | 12977242 | + | BniB04g024110.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.08 | 119,449.27 Da | 49.23 | 81.00 | -0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00307 | Calponin homology (CH) domain | 43 | 140 | 9.1E-8 | IPR001715 |
| Pfam | PF00225 | Kinesin motor domain | 478 | 798 | 2.1E-102 | IPR001752 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 472 | 837 | 3.92E-116 | IPR027417 |
| SUPERFAMILY | SSF47576 | Calponin-homology domain, CH-domain | 44 | 138 | 1.1E-15 | IPR036872 |
| Gene3D | G3DSA:1.10.418.10 | - | 34 | 145 | 2.4E-14 | IPR036872 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 413 | 802 | 4.1E-127 | IPR036961 |
| SMART | SM00129 | kinesin_4 | 470 | 808 | 3.7E-151 | IPR001752 |
| SMART | SM00033 | ch_5 | 41 | 137 | 2.0E-5 | IPR001715 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 472 | 800 | 109.25132 | IPR001752 |
| ProSiteProfiles | PS50021 | Calponin homology (CH) domain profile. | 39 | 142 | 14.930761 | IPR001715 |
| ProSitePatterns | PS00411 | Kinesin motor domain signature. | 700 | 711 | - | IPR019821 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 547 | 568 | 9.3E-39 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 670 | 687 | 9.3E-39 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 701 | 719 | 9.3E-39 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 750 | 771 | 9.3E-39 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 985 | 1071 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 905 | 922 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 886 | 904 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 842 | 922 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1020 | 1065 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 986 | 1010 | - | - |
| Coils | Coil | Coil | 293 | 341 | - | - |
| Coils | Coil | Coil | 350 | 384 | - | - |
| Coils | Coil | Coil | 821 | 844 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G63640.1 | P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain. | 0 |
| RefSeq | XP_013612833.1 | PREDICTED: kinesin-4-like isoform X2 [Brassica oleracea var. oleracea] | 0 |
| B3H6Z8 | Kinesin-like protein KIN-14J OS=Arabidopsis thaliana OX=3702 GN=KIN14J PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7SAW4 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_031559 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology