Basic Information
Locus ID:
BniB04g023230.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
atpi4k gamma 4,pi4k gamma 4,ubdk gamma 4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B4 | 12547204 | 12548786 | + | BniB04g023230.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.22 | 55,696.04 Da | 40.00 | 87.53 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17039 | Ubl_ubiquitin_like | 71 | 140 | 6.08467E-11 | - |
| Pfam | PF00240 | Ubiquitin family | 72 | 143 | 3.1E-6 | IPR000626 |
| Pfam | PF00240 | Ubiquitin family | 3 | 64 | 1.0E-6 | IPR000626 |
| Pfam | PF00454 | Phosphatidylinositol 3- and 4-kinase | 198 | 450 | 7.0E-58 | IPR000403 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 54 | 143 | 1.08E-13 | IPR029071 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 337 | 482 | 8.77E-6 | IPR011009 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 2 | 65 | 2.99E-5 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 68 | 148 | 5.6E-11 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 67 | 1.7E-6 | - |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 1 | 57 | 9.264643 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 69 | 146 | 11.572835 | IPR000626 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G46500.1 | phosphoinositide 4-kinase gamma 4. Phosphoinositide kinase which undergo autophosphorylation and phosphorylate serine/threonine residues of protein substrates. Contains phosphoinositide 3/4-kinase and ubiquitin-like domains. Phosphorylates PUFD1 and RPN10 in vitro. | 0 |
| RefSeq | XP_009112874.2 | phosphatidylinositol 4-kinase gamma 2 [Brassica rapa] | 0 |
| Q9SGW8 | Phosphatidylinositol 4-kinase gamma 2 OS=Arabidopsis thaliana OX=3702 GN=PI4KG2 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8X7SBC4 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_031498 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology