Basic Information
Locus ID:
BniB04g022860.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
atpi4k gamma 4,pi4k gamma 4,ubdk gamma 4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B4 | 12341737 | 12343424 | - | BniB04g022860.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.11 | 59,474.65 Da | 40.58 | 91.08 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17039 | Ubl_ubiquitin_like | 106 | 175 | 3.94463E-10 | - |
| Pfam | PF00454 | Phosphatidylinositol 3- and 4-kinase | 234 | 486 | 1.2E-57 | IPR000403 |
| Pfam | PF00240 | Ubiquitin family | 26 | 99 | 3.5E-9 | IPR000626 |
| Pfam | PF00240 | Ubiquitin family | 107 | 178 | 2.7E-5 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 103 | 178 | 1.54E-12 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 24 | 100 | 2.53E-9 | IPR029071 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 373 | 519 | 1.63E-5 | IPR011009 |
| Gene3D | G3DSA:3.10.20.90 | - | 103 | 183 | 1.6E-10 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 16 | 102 | 1.4E-9 | - |
| SMART | SM00213 | ubq_7 | 24 | 98 | 1.3 | IPR000626 |
| SMART | SM00213 | ubq_7 | 104 | 177 | 1.2 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 24 | 92 | 11.246203 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 104 | 179 | 11.006675 | IPR000626 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G46500.1 | phosphoinositide 4-kinase gamma 4. Phosphoinositide kinase which undergo autophosphorylation and phosphorylate serine/threonine residues of protein substrates. Contains phosphoinositide 3/4-kinase and ubiquitin-like domains. Phosphorylates PUFD1 and RPN10 in vitro. | 0 |
| RefSeq | XP_013606323.1 | PREDICTED: phosphatidylinositol 4-kinase gamma 2-like [Brassica oleracea var. oleracea] | 0 |
| Q9SGW8 | Phosphatidylinositol 4-kinase gamma 2 OS=Arabidopsis thaliana OX=3702 GN=PI4KG2 PE=1 SV=2 | 0 | |
| TrEMBL | A0A0D3E495 | 1-phosphatidylinositol 4-kinase OS=Brassica oleracea var. oleracea OX=109376 GN=106313128 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology