Basic Information
Locus ID:
BniB04g022190.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B4 | 11903633 | 11909444 | - | BniB04g022190.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.65 | 117,303.76 Da | 46.29 | 80.56 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00225 | Kinesin motor domain | 465 | 785 | 8.8E-103 | IPR001752 |
| Pfam | PF00307 | Calponin homology (CH) domain | 30 | 128 | 9.0E-9 | IPR001715 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 459 | 824 | 1.99E-116 | IPR027417 |
| SUPERFAMILY | SSF47576 | Calponin-homology domain, CH-domain | 30 | 126 | 5.89E-15 | IPR036872 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 400 | 789 | 5.4E-127 | IPR036961 |
| Gene3D | G3DSA:1.10.418.10 | - | 20 | 132 | 1.4E-13 | IPR036872 |
| SMART | SM00129 | kinesin_4 | 457 | 795 | 3.2E-153 | IPR001752 |
| SMART | SM00033 | ch_5 | 28 | 124 | 4.8E-4 | IPR001715 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 459 | 787 | 109.25132 | IPR001752 |
| ProSiteProfiles | PS50021 | Calponin homology (CH) domain profile. | 26 | 129 | 16.388687 | IPR001715 |
| ProSitePatterns | PS00411 | Kinesin motor domain signature. | 687 | 698 | - | IPR019821 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 657 | 674 | 1.3E-39 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 534 | 555 | 1.3E-39 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 737 | 758 | 1.3E-39 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 688 | 706 | 1.3E-39 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 969 | 1002 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 969 | 1054 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 846 | 917 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 892 | 917 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1003 | 1048 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 873 | 891 | - | - |
| Coils | Coil | Coil | 801 | 821 | - | - |
| Coils | Coil | Coil | 287 | 378 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G63640.1 | P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain. | 0 |
| RefSeq | XP_013612689.1 | PREDICTED: kinesin-4-like isoform X1 [Brassica oleracea var. oleracea] | 0 |
| B3H6Z8 | Kinesin-like protein KIN-14J OS=Arabidopsis thaliana OX=3702 GN=KIN14J PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7SEZ6 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_031405 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology