Basic Information
Locus ID:
BniB04g021300.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B4 | 11309901 | 11310929 | + | BniB04g021300.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.15 | 34,674.59 Da | 50.65 | 74.60 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 91 | 299 | 1.6048E-104 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 86 | 297 | 8.8E-54 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 62 | 297 | 1.89E-67 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 73 | 166 | 6.0E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 167 | 301 | 5.8E-44 | - |
| SMART | SM00220 | serkin_6 | 84 | 302 | 1.7E-38 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 84 | 302 | 38.94413 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 206 | 218 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 265 | 287 | 9.2E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 162 | 175 | 9.2E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 246 | 256 | 9.2E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 200 | 218 | 9.2E-12 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 20 | 43 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G62400.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_013609235.1 | PREDICTED: serine/threonine-protein kinase HT1-like [Brassica oleracea var. oleracea] | 0 |
| Q2MHE4 | Serine/threonine/tyrosine-protein kinase HT1 OS=Arabidopsis thaliana OX=3702 GN=HT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7V582 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_031323 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology