Basic Information
Locus ID:
BniB04g021280.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B4 | 11288291 | 11289797 | + | BniB04g021280.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.13 | 43,907.07 Da | 56.20 | 76.67 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 91 | 338 | 4.87253E-131 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 86 | 337 | 3.1E-68 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 63 | 338 | 2.16E-81 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 73 | 166 | 9.6E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 167 | 367 | 2.8E-62 | - |
| SMART | SM00220 | serkin_6 | 84 | 345 | 1.7E-63 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 84 | 357 | 42.788578 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 206 | 218 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 309 | 331 | 1.4E-19 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 200 | 218 | 1.4E-19 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 246 | 256 | 1.4E-19 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 162 | 175 | 1.4E-19 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 265 | 287 | 1.4E-19 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 20 | 43 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G62400.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_013675882.1 | serine/threonine/tyrosine-protein kinase HT1 [Brassica napus] | 0 |
| Q2MHE4 | Serine/threonine/tyrosine-protein kinase HT1 OS=Arabidopsis thaliana OX=3702 GN=HT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7V582 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_031323 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology