Basic Information
Locus ID:
BniB04g013020.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Short Name:
UAH
Description:
Peptidase family M20/M25/M40
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B4 | 6295394 | 6298012 | - | BniB04g013020.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.44 | 27,476.67 Da | 62.49 | 100.24 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF53187 | Zn-dependent exopeptidases | 175 | 232 | 1.75E-14 | - |
| Gene3D | G3DSA:3.40.630.10 | Zn peptidases | 75 | 240 | 1.4E-25 | - |
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G43600.1 | ureidoglycolate amidohydrolase. Encodes a protein with ureidoglycolate amidohydrolase activity in vitro. It is 27% identical and 43% similar to the E. coli allantoate amidohydrolase (AAH), but, in vitro assays with purified protein and allantoate as a substrate do not show any increase in ammonium concentration, indicating that there this enzyme has no AAH activity. | 0 |
| RefSeq | XP_006403220.1 | ureidoglycolate hydrolase [Eutrema salsugineum] | 0 |
| Q8VXY9 | Ureidoglycolate hydrolase OS=Arabidopsis thaliana OX=3702 GN=UAH PE=1 SV=1 | 0 | |
| TrEMBL | V4NF06 | M20_dimer domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10003195mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_03.3046.V1.1, AsparagusV1_03.3048.V1.1 |
| Brassicaceae | Brassica nigra | 1 | BniB04g013020.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq05G1488 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl05G1478 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-15456 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g23658 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc03g16320 |