Basic Information
Locus ID:
BniB04g010030.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B4 | 4798872 | 4801019 | + | BniB04g010030.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.79 | 66,637.23 Da | 43.91 | 76.79 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05574 | STKc_phototropin_like | 223 | 567 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 445 | 548 | 4.2E-21 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 226 | 375 | 1.6E-35 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 202 | 572 | 2.16E-80 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 309 | 375 | 2.2E-49 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 442 | 566 | 7.5E-37 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 223 | 308 | 2.2E-49 | - |
| SMART | SM00220 | serkin_6 | 225 | 548 | 3.3E-86 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 225 | 548 | 43.834492 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 346 | 358 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 119 | 153 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 132 | 153 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 79 | 106 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47750.1 | D6 protein kinase like 2. | 0 |
| RefSeq | XP_018433110.1 | PREDICTED: LOW QUALITY PROTEIN: serine/threonine-protein kinase D6PKL2-like [Raphanus sativus] | 0 |
| Q39183 | Serine/threonine-protein kinase D6PKL2 OS=Arabidopsis thaliana OX=3702 GN=D6PKL2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6J0JBW5 | LOW QUALITY PROTEIN: serine/threonine-protein kinase D6PKL2-like OS=Raphanus sativus OX=3726 GN=LOC108805672 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology