Basic Information
Locus ID:
BniB04g009990.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Belongs to the glycosyltransferase 8 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B4 | 4782419 | 4785033 | - | BniB04g009990.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.88 | 72,960.14 Da | 40.36 | 84.83 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06429 | GT8_like_1 | 326 | 620 | 5.14152E-127 | - |
| Pfam | PF01501 | Glycosyl transferase family 8 | 295 | 606 | 6.4E-94 | IPR002495 |
| SUPERFAMILY | SSF53448 | Nucleotide-diphospho-sugar transferases | 326 | 632 | 1.01E-69 | IPR029044 |
| Gene3D | G3DSA:3.90.550.10 | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 328 | 625 | 9.1E-45 | IPR029044 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 146 | 169 | - | - |
| Coils | Coil | Coil | 257 | 277 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47780.1 | galacturonosyltransferase 4. Encodes a protein with putative galacturonosyltransferase activity. | 0 |
| RefSeq | XP_033139659.1 | probable galacturonosyltransferase 4 isoform X2 [Brassica rapa] | 0 |
| Q93ZX7 | Probable galacturonosyltransferase 4 OS=Arabidopsis thaliana OX=3702 GN=GAUT4 PE=2 SV=1 | 0 | |
| TrEMBL | M4DCY2 | Hexosyltransferase OS=Brassica rapa subsp. pekinensis OX=51351 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology