Basic Information
Locus ID:
BniB04g009490.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
DnaJ molecular chaperone homology domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B4 | 4575561 | 4576487 | - | BniB04g009490.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.08 | 34,124.94 Da | 44.18 | 64.94 | -0.63 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06257 | DnaJ | 71 | 124 | 1.00658E-17 | IPR001623 |
| CDD | cd15489 | PHD_SF | 163 | 210 | 0.00301832 | - |
| Pfam | PF00226 | DnaJ domain | 71 | 133 | 2.6E-18 | IPR001623 |
| SUPERFAMILY | SSF46565 | Chaperone J-domain | 65 | 136 | 4.06E-17 | IPR036869 |
| Gene3D | G3DSA:1.10.287.110 | DnaJ domain | 57 | 155 | 1.0E-17 | IPR036869 |
| SMART | SM00271 | dnaj_3 | 70 | 128 | 4.8E-14 | IPR001623 |
| ProSiteProfiles | PS50076 | dnaJ domain profile. | 71 | 136 | 15.21494 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 108 | 128 | 1.5E-6 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 73 | 91 | 1.5E-6 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 92 | 107 | 1.5E-6 | IPR001623 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 247 | 308 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G01710.1 | Chaperone DnaJ-domain superfamily protein. | 0 |
| RefSeq | XP_018433149.1 | PREDICTED: uncharacterized protein LOC108805714 [Raphanus sativus] | 0 |
| Q17438 | DnaJ homolog subfamily B member 1 OS=Caenorhabditis elegans OX=6239 GN=dnj-1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7V5J3 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_030377 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology