Basic Information
Locus ID:
BniB04g008710.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Short Name:
WRKY3
Description:
Transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B4 | 4137445 | 4139375 | + | BniB04g008710.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.09 | 52,521.62 Da | 53.78 | 54.47 | -0.81 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 387 | 444 | 1.8E-25 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 232 | 288 | 1.3E-25 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 378 | 446 | 8.24E-30 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 229 | 290 | 7.19E-26 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 371 | 447 | 2.5E-36 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 216 | 291 | 5.2E-28 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 231 | 289 | 3.3E-36 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 386 | 445 | 7.6E-39 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 381 | 446 | 38.193405 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 226 | 290 | 23.513811 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 282 | 369 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 342 | 358 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 295 | 337 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 26 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 184 | 202 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 184 | 236 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G03340.1 | WRKY DNA-binding protein 3. Encodes WRKY DNA-binding protein 3 (WRKY3). | 0 |
| RefSeq | NP_001288910.1 | probable WRKY transcription factor 3 [Brassica rapa] | 0 |
| Q9ZQ70 | Probable WRKY transcription factor 3 OS=Arabidopsis thaliana OX=3702 GN=WRKY3 PE=2 SV=1 | 0 | |
| TrEMBL | M4ECP4 | WRKY transcription factor 3 OS=Brassica rapa subsp. pekinensis OX=51351 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology