Basic Information
Locus ID:
BniB04g008110.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B4 | 3848706 | 3850646 | - | BniB04g008110.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.07 | 58,845.83 Da | 44.55 | 85.16 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01603 | Protein phosphatase 2A regulatory B subunit (B56 family) | 92 | 501 | 6.8E-190 | IPR002554 |
| SUPERFAMILY | SSF48371 | ARM repeat | 104 | 485 | 3.58E-159 | IPR016024 |
| Gene3D | G3DSA:1.25.10.10 | - | 99 | 502 | 8.9E-199 | IPR011989 |
| PIRSF | PIRSF028043 | PP2A_B56 | 1 | 508 | 6.0E-248 | IPR002554 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 29 | 71 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 71 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Pathway:
ko03015 (mRNA surveillance pathway)
map03015 (mRNA surveillance pathway)
ko04071 (Sphingolipid signaling pathway)
map04071 (Sphingolipid signaling pathway)
ko04113 (Meiosis - yeast)
map04113 (Meiosis - yeast)
ko04114 (Oocyte meiosis)
map04114 (Oocyte meiosis)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G26020.1 | Protein phosphatase 2A regulatory B subunit family protein. Encodes protein phosphatase 2A (PP2A) B'eta subunit. Targeted to nucleus and cytosol. | 0 |
| RefSeq | XP_009129571.1 | serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' eta isoform [Brassica rapa] | 0 |
| Q9LU89 | Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' eta isoform OS=Arabidopsis thaliana OX=3702 GN=B'ETA PE=1 SV=1 | 0 | |
| TrEMBL | A0A6J0JZY6 | Serine/threonine protein phosphatase 2A regulatory subunit OS=Raphanus sativus OX=3726 GN=LOC108813070 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology