Basic Information
Locus ID:
BniB04g006880.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B4 | 3346999 | 3349016 | - | BniB04g006880.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.54 | 50,985.98 Da | 38.23 | 79.87 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 116 | 393 | 2.17965E-97 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 114 | 390 | 8.3E-47 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 92 | 400 | 1.64E-79 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 196 | 410 | 1.1E-63 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 86 | 195 | 9.1E-29 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 110 | 396 | 38.223297 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 239 | 251 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 116 | 148 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 58 | 83 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 58 | 72 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 430 | 449 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 414 | 460 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G28690.2 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_009129365.1 | probable serine/threonine-protein kinase PIX7 isoform X2 [Brassica rapa] | 0 |
| F4J0D2 | Serine/threonine-protein kinase PBL36 OS=Arabidopsis thaliana OX=3702 GN=PBL36 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8X7S8M2 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_030124 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology