Basic Information
Locus ID:
BniB04g004990.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Short Name:
NHX1
Description:
Sodium hydrogen exchanger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B4 | 2469567 | 2472639 | - | BniB04g004990.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.86 | 60,594.13 Da | 35.06 | 105.69 | 0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00999 | Sodium/hydrogen exchanger family | 32 | 445 | 7.4E-58 | IPR006153 |
| Gene3D | G3DSA:6.10.140.1330 | - | 149 | 200 | 9.0E-14 | - |
| TIGRFAM | TIGR00840 | b_cpa1: sodium/hydrogen exchanger 3 | 28 | 456 | 6.4E-76 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 156 | 166 | 1.9E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 116 | 124 | 1.9E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 87 | 98 | 1.9E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 101 | 115 | 1.9E-11 | IPR004709 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G27150.1 | Na+/H+ exchanger 1. Encodes a vacuolar sodium/proton antiporter involved in salt tolerance, ion homeostasis, and leaf development. | 0 |
| RefSeq | XP_006394990.1 | sodium/hydrogen exchanger 1 [Eutrema salsugineum] | 0 |
| Q68KI4 | Sodium/hydrogen exchanger 1 OS=Arabidopsis thaliana OX=3702 GN=NHX1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8X7SG04 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_034189 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology