Basic Information
Locus ID:
BniB04g002000.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
BTB POZ and TAZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B4 | 937744 | 940112 | + | BniB04g002000.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.38 | 41,364.77 Da | 56.76 | 87.84 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14733 | BACK | 129 | 181 | 3.57169E-6 | - |
| Pfam | PF02135 | TAZ zinc finger | 211 | 304 | 1.2E-9 | IPR000197 |
| Pfam | PF00651 | BTB/POZ domain | 25 | 122 | 4.5E-10 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 25 | 157 | 2.98E-11 | IPR011333 |
| SUPERFAMILY | SSF57933 | TAZ domain | 202 | 308 | 2.09E-18 | IPR035898 |
| Gene3D | G3DSA:1.20.1020.10 | TAZ domain | 201 | 314 | 8.9E-14 | IPR035898 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 18 | 123 | 3.4E-16 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 128 | 200 | 3.1E-12 | - |
| SMART | SM00551 | TAZ_2 | 204 | 305 | 1.5E-13 | IPR000197 |
| SMART | SM00225 | BTB_4 | 25 | 128 | 2.3E-7 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 25 | 96 | 10.509501 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G63160.1 | BTB and TAZ domain protein 1. BTB and TAZ domain protein. Short-lived nuclear-cytoplasmic protein targeted for degradation by the 26S proteosome pathway. Acts redundantly with BT2 and BT3 during female gametophyte development. | 0 |
| RefSeq | XP_018458178.1 | PREDICTED: BTB/POZ and TAZ domain-containing protein 1 isoform X1 [Raphanus sativus] | 0 |
| Q9FMK7 | BTB/POZ and TAZ domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7S5T6 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_029675 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology