Basic Information
Locus ID:
BniB04g001680.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Universal stress protein family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B4 | 805518 | 808382 | - | BniB04g001680.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.75 | 73,765.34 Da | 43.62 | 89.54 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00293 | USP_Like | 19 | 124 | 2.79572E-7 | - |
| Pfam | PF00069 | Protein kinase domain | 332 | 595 | 1.6E-40 | IPR000719 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 19 | 126 | 5.36E-5 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 311 | 601 | 1.5E-73 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 405 | 628 | 7.6E-56 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 298 | 404 | 1.6E-28 | - |
| SMART | SM00220 | serkin_6 | 330 | 600 | 2.5E-25 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 330 | 608 | 36.074928 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 451 | 463 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 336 | 358 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G63940.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_013621373.1 | PREDICTED: probable receptor-like protein kinase At3g17420 isoform X1 [Brassica oleracea var. oleracea] | 0 |
| B5X4Z9 | Protein kinase STUNTED OS=Arabidopsis thaliana OX=3702 GN=STU PE=2 SV=1 | 0 | |
| TrEMBL | A0A8X7S4X9 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_029709 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology