Basic Information
Locus ID:
BniB04g000740.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Receptor-like cytosolic serine threonine-protein kinase RBK1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B4 | 365451 | 367558 | + | BniB04g000740.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.30 | 52,936.73 Da | 50.00 | 79.66 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 163 | 426 | 1.69513E-88 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 160 | 426 | 2.1E-40 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 142 | 429 | 9.58E-72 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 123 | 234 | 1.2E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 236 | 436 | 6.5E-58 | - |
| SMART | SM00220 | serkin_6 | 157 | 433 | 2.9E-21 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 157 | 432 | 34.46365 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 163 | 186 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 279 | 291 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 44 | 76 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 76 | - | - |
| Coils | Coil | Coil | 6 | 26 | - | - |
| Coils | Coil | Coil | 461 | 470 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G65530.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_013678493.2 | receptor-like cytosolic serine/threonine-protein kinase RBK1 [Brassica napus] | 0 |
| Q8H1D6 | Receptor-like cytosolic serine/threonine-protein kinase RBK1 OS=Arabidopsis thaliana OX=3702 GN=RBK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7RA87 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_055811 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology