Basic Information
Locus ID:
BniB03g070110.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B3 | 54624406 | 54627267 | - | BniB03g070110.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.69 | 65,104.78 Da | 44.70 | 67.28 | -0.77 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05599 | STKc_NDR_like | 121 | 486 | 0.0 | - |
| Pfam | PF00433 | Protein kinase C terminal domain | 441 | 485 | 2.0E-5 | IPR017892 |
| Pfam | PF00069 | Protein kinase domain | 125 | 422 | 2.2E-65 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 96 | 475 | 4.72E-87 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 113 | 207 | 1.8E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 208 | 439 | 6.3E-69 | - |
| SMART | SM00220 | serkin_6 | 122 | 422 | 5.9E-105 | IPR000719 |
| SMART | SM00133 | pkinase_C_6 | 423 | 487 | 3.0E-4 | IPR000961 |
| ProSiteProfiles | PS51285 | AGC-kinase C-terminal domain profile. | 423 | 495 | 13.959127 | IPR000961 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 122 | 422 | 47.933353 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 128 | 151 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 241 | 253 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 281 | 306 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 52 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 519 | 536 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 503 | 571 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 28 | 52 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G20470.1 | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein. | 0 |
| RefSeq | XP_018440427.1 | PREDICTED: serine/threonine-protein kinase tricorner [Raphanus sativus] | 0 |
| Q15208 | Serine/threonine-protein kinase 38 OS=Homo sapiens OX=9606 GN=STK38 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6J0JXK8 | serine/threonine-protein kinase tricorner OS=Raphanus sativus OX=3726 GN=LOC108812620 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology