Basic Information
Locus ID:
BniB03g068630.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome/Scaffold | Start | End | Strand | ID |
|---|---|---|---|---|
| B3 | 53346817 | 53349674 | - | BniB03g068630.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.45 | 60,837.12 Da | 38.42 | 79.41 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05599 | STKc_NDR_like | 105 | 482 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 306 | 417 | 7.2E-19 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 109 | 256 | 1.9E-43 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 104 | 493 | 7.15E-89 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 105 | 190 | 1.6E-62 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 436 | 446 | 3.8E-42 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 191 | 258 | 1.6E-62 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 310 | 435 | 3.8E-42 | - |
| SMART | SM00220 | serkin_6 | 107 | 417 | 5.7E-102 | IPR000719 |
| SMART | SM00133 | pkinase_C_6 | 418 | 483 | 1.4E-4 | IPR000961 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 107 | 417 | 46.746098 | IPR000719 |
| ProSiteProfiles | PS51285 | AGC-kinase C-terminal domain profile. | 418 | 491 | 12.372381 | IPR000961 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 226 | 238 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 113 | 136 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 499 | 514 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 495 | 514 | - | - |
| Coils | Coil | Coil | 73 | 93 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G19400.1 | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein. | 0 |
| RefSeq | XP_048620379.1 | serine/threonine-protein kinase tricornered [Brassica napus] | 0 |
| Q9NBK5 | Serine/threonine-protein kinase tricornered OS=Drosophila melanogaster OX=7227 GN=trc PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X8B6T1 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_016725 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology