Basic Information
Locus ID:
BniB03g066280.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
WD repeat-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B3 | 50734217 | 50735073 | + | BniB03g066280.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.96 | 11,845.80 Da | 65.50 | 85.90 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G16830.1 | TOPLESS-related 2. | 0 |
| RefSeq | XP_009146056.1 | topless-related protein 2 [Brassica rapa] | 0 |
| Q9LRZ0 | Topless-related protein 2 OS=Arabidopsis thaliana OX=3702 GN=TPR2 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8S9Q4N6 | Plasmid stabilization system OS=Brassica cretica OX=69181 GN=F2Q69_00019512 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000042190 |
| Anacardiaceae | Pistacia vera | 2 | pistato.v30080380, pistato.v30275980 |
| Apiaceae | Apium graveolens | 1 | Ag4G00121 |
| Brassicaceae | Brassica nigra | 3 | BniB03g066280.2N, BniB05g041810.2N, BniB05g054270.2N |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-10809 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00027742 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb4G25036 |
| Posidoniaceae | Posidonia oceanica | 9 | gene.Posoc02g00930, gene.Posoc02g09460, gene.Posoc02g27990 ... |
| Tamaricaceae | Tamarix chinensis | 1 | TC08G2213 |