Basic Information
Locus ID:
BniB03g065860.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
2OG-Fe(II) oxygenase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B3 | 50390790 | 50392818 | + | BniB03g065860.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.72 | 32,884.74 Da | 42.38 | 80.41 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13640 | 2OG-Fe(II) oxygenase superfamily | 169 | 287 | 9.3E-20 | IPR044862 |
| Gene3D | G3DSA:2.60.120.620 | q2cbj1_9rhob like domain | 81 | 288 | 1.8E-80 | - |
| SMART | SM00702 | p4hc | 89 | 287 | 5.7E-62 | IPR006620 |
| ProSiteProfiles | PS51471 | Fe(2+) 2-oxoglutarate dioxygenase domain profile. | 165 | 288 | 12.635294 | IPR005123 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 56 | 75 | - | - |
Gene Ontology
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G17720.1 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein. | 0 |
| RefSeq | XP_009121088.1 | prolyl 4-hydroxylase 5 [Brassica rapa] | 0 |
| Q24JN5 | Prolyl 4-hydroxylase 5 OS=Arabidopsis thaliana OX=3702 GN=P4H5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A078G5R7 | (rape) hypothetical protein OS=Brassica napus OX=3708 GN=BnaC07g06600D PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology