Basic Information
Locus ID:
BniB03g065790.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
kinase) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B3 | 50164196 | 50167308 | - | BniB03g065790.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.51 | 60,796.66 Da | 48.17 | 88.77 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 284 | 527 | 6.93604E-134 | - |
| CDD | cd04928 | ACT_TyrKc | 172 | 239 | 1.46515E-34 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 278 | 527 | 1.6E-71 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 260 | 527 | 4.72E-83 | IPR011009 |
| SUPERFAMILY | SSF55021 | ACT-like | 172 | 243 | 5.83E-10 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 357 | 536 | 3.0E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 267 | 356 | 3.2E-29 | - |
| SMART | SM00220 | serkin_6 | 278 | 531 | 1.3E-64 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 278 | 531 | 44.936947 | IPR000719 |
| ProSiteProfiles | PS51671 | ACT domain profile. | 174 | 249 | 13.262377 | IPR002912 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 395 | 407 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 435 | 445 | 1.8E-17 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 454 | 476 | 1.8E-17 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 352 | 365 | 1.8E-17 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 498 | 520 | 1.8E-17 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 389 | 407 | 1.8E-17 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 23 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 104 | 137 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G17700.1 | ACT-like protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_018466323.1 | PREDICTED: serine/threonine-protein kinase STY8-like [Raphanus sativus] | 0 |
| O22558 | Serine/threonine-protein kinase STY8 OS=Arabidopsis thaliana OX=3702 GN=STY8 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8X7W5A5 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_016534 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology