Basic Information
Locus ID:
BniB03g057660.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Short Name:
SAPK2
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B3 | 31336353 | 31336998 | - | BniB03g057660.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.00 | 13,765.76 Da | 27.86 | 100.67 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 4 | 119 | 9.6E-26 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1 | 117 | 1.83E-32 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 82 | 120 | 4.8E-7 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 79 | 1.2E-30 | - |
| SMART | SM00220 | serkin_6 | 4 | 120 | 1.4E-6 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 4 | 120 | 20.668867 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 10 | 33 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
ko01521 (EGFR tyrosine kinase inhibitor resistance)
map01521 (EGFR tyrosine kinase inhibitor resistance)
ko03010 (Ribosome)
map03010 (Ribosome)
ko04066 (HIF-1 signaling pathway)
map04066 (HIF-1 signaling pathway)
ko04150 (mTOR signaling pathway)
map04150 (mTOR signaling pathway)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04371 (Apelin signaling pathway)
map04371 (Apelin signaling pathway)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G78290.2 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_006390000.1 | serine/threonine-protein kinase SRK2C [Eutrema salsugineum] | 0 |
| Q9M9E9 | Serine/threonine-protein kinase SRK2C OS=Arabidopsis thaliana OX=3702 GN=SRK2C PE=1 SV=1 | 0 | |
| TrEMBL | A0A816ZQT3 | (rape) hypothetical protein OS=Brassica napus OX=3708 GN=DARMORV10_A07P43580.1 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Suaeda glauca | 5 | Sgl02968, Sgl04141, Sgl08058, Sgl09200, Sgl53193 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30064480 |
| Arecaceae | Cocos nucifera | 1 | scaffold027032G000010 |
| Brassicaceae | Brassica nigra | 1 | BniB03g057660.2N |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate03g17300 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-9441 |
| Plumbaginaceae | Limonium bicolor | 3 | Lb2G08624, Lb2G13984, Lb7G34421 |
| Poaceae | Echinochloa crus-galli | 1 | BH01.3777 |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_3BG0278430 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.4HG0414820.1 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-11250, nbis-gene-12098 |
| Solanaceae | Solanum chilense | 1 | SOLCI006160200 |