Basic Information
Locus ID:
BniB03g056410.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B3 | 30496651 | 30499226 | - | BniB03g056410.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.62 | 65,001.14 Da | 41.27 | 91.14 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00293 | USP_Like | 10 | 143 | 1.7127E-9 | - |
| Pfam | PF00069 | Protein kinase domain | 274 | 479 | 1.2E-42 | IPR000719 |
| Pfam | PF00582 | Universal stress protein family | 9 | 143 | 2.8E-10 | IPR006016 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 9 | 143 | 6.17E-6 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 249 | 541 | 2.83E-76 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 230 | 344 | 2.7E-29 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 345 | 569 | 1.2E-56 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 8 | 146 | 1.8E-6 | IPR014729 |
| SMART | SM00220 | serkin_6 | 270 | 584 | 8.3E-33 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 270 | 548 | 36.993637 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 391 | 403 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 276 | 298 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 219 | 243 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G77280.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_018464088.1 | PREDICTED: probable receptor-like serine/threonine-protein kinase At5g57670 [Raphanus sativus] | 0 |
| B5X4Z9 | Protein kinase STUNTED OS=Arabidopsis thaliana OX=3702 GN=STU PE=2 SV=1 | 0 | |
| TrEMBL | A0A6J0LW95 | probable receptor-like serine/threonine-protein kinase At5g57670 OS=Raphanus sativus OX=3726 GN=LOC108835313 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology