Basic Information
Locus ID:
BniB03g050980.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B3 | 27178541 | 27181658 | - | BniB03g050980.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.94 | 86,134.53 Da | 56.10 | 81.81 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 11 | 176 | 4.61718E-38 | - |
| CDD | cd14066 | STKc_IRAK | 414 | 667 | 5.54351E-87 | - |
| Pfam | PF00582 | Universal stress protein family | 13 | 165 | 3.0E-5 | IPR006016 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 413 | 667 | 8.8E-41 | IPR001245 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 13 | 173 | 6.03E-5 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 388 | 667 | 8.77E-67 | IPR011009 |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 12 | 175 | 1.2E-7 | IPR014729 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 377 | 480 | 1.3E-24 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 481 | 698 | 1.2E-48 | - |
| SMART | SM00220 | serkin_6 | 408 | 671 | 2.2E-24 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 408 | 685 | 34.49192 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 526 | 538 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 685 | 769 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 210 | 260 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 272 | 291 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 689 | 712 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 742 | 757 | - | - |
| Coils | Coil | Coil | 358 | 388 | - | - |
| Coils | Coil | Coil | 294 | 321 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G72760.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_013589665.1 | PREDICTED: U-box domain-containing protein 35 [Brassica oleracea var. oleracea] | 0 |
| Q9SW11 | U-box domain-containing protein 35 OS=Arabidopsis thaliana OX=3702 GN=PUB35 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8X7W3L9 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_015013 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology