Basic Information
Locus ID:
BniB03g048900.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Phosphatidylinositol-4-phosphate 5-Kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B3 | 25812200 | 25818076 | + | BniB03g048900.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.53 | 173,687.67 Da | 50.49 | 74.98 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03334 | Fab1_TCP | 270 | 539 | 3.37608E-130 | - |
| CDD | cd17300 | PIPKc_PIKfyve | 1273 | 1536 | 1.80044E-151 | IPR044769 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 293 | 528 | 7.4E-35 | IPR002423 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1479 | 1534 | 5.6E-7 | IPR002498 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1312 | 1477 | 5.4E-34 | IPR002498 |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 337 | 505 | 1.47E-39 | IPR027409 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1267 | 1536 | 3.71E-82 | - |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1225 | 1393 | 5.4E-38 | IPR027484 |
| Gene3D | G3DSA:3.30.810.10 | - | 1394 | 1537 | 1.3E-41 | - |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 336 | 505 | 4.5E-52 | IPR027409 |
| SMART | SM00330 | PIPK_2 | 1244 | 1537 | 4.6E-116 | IPR002498 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1211 | 1536 | 59.984055 | IPR002498 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 135 | 151 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 989 | 1003 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1004 | 1029 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 122 | 151 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 989 | 1030 | - | - |
| Coils | Coil | Coil | 914 | 934 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G71010.1 | FORMS APLOID AND BINUCLEATE CELLS 1C. Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the proposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown. | 0 |
| RefSeq | XP_033130197.1 | putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C isoform X2 [Brassica rapa] | 0 |
| Q9SSJ8 | Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C OS=Arabidopsis thaliana OX=3702 GN=FAB1C PE=2 SV=1 | 0 | |
| TrEMBL | A0A8X7W0J8 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_014861 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology