Basic Information
Locus ID:
BniB03g048250.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B3 | 25387754 | 25390433 | - | BniB03g048250.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.65 | 73,170.16 Da | 40.50 | 86.31 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 337 | 601 | 3.63995E-87 | - |
| Pfam | PF01657 | Salt stress response/antifungal | 53 | 137 | 4.5E-9 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 160 | 246 | 2.6E-10 | IPR002902 |
| Pfam | PF00069 | Protein kinase domain | 332 | 543 | 5.2E-43 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 316 | 626 | 1.75E-75 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 145 | 249 | 1.6E-15 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 291 | 406 | 1.5E-32 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 32 | 139 | 2.5E-15 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 407 | 607 | 3.5E-56 | - |
| SMART | SM00220 | serkin_6 | 331 | 614 | 1.2E-28 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 145 | 249 | 14.615066 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 331 | 614 | 36.145599 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 33 | 139 | 15.149139 | IPR002902 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 452 | 464 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 337 | 359 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 633 | 656 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 633 | 648 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G70530.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 3. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_013614128.1 | PREDICTED: cysteine-rich receptor-like protein kinase 3 [Brassica oleracea var. oleracea] | 0 |
| Q9CAL2 | Cysteine-rich receptor-like protein kinase 3 OS=Arabidopsis thaliana OX=3702 GN=CRK3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8X7W107 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_014819 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology