Basic Information
Locus ID:
BniB03g048230.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B3 | 25361059 | 25367384 | - | BniB03g048230.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.61 | 140,999.77 Da | 40.06 | 86.45 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 955 | 1227 | 5.68475E-92 | - |
| CDD | cd14066 | STKc_IRAK | 350 | 614 | 1.08462E-86 | - |
| Pfam | PF00069 | Protein kinase domain | 951 | 1199 | 1.0E-47 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 345 | 552 | 9.1E-45 | IPR000719 |
| Pfam | PF01657 | Salt stress response/antifungal | 679 | 757 | 1.1E-10 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 772 | 867 | 3.9E-11 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 173 | 259 | 6.2E-10 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 67 | 150 | 1.2E-8 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 933 | 1245 | 4.99E-77 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 330 | 643 | 1.34E-77 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 304 | 419 | 3.9E-31 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 658 | 759 | 4.1E-13 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 909 | 1024 | 6.2E-33 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 769 | 869 | 5.9E-15 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1025 | 1232 | 2.1E-58 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 420 | 619 | 2.1E-59 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 45 | 152 | 1.4E-14 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 158 | 262 | 4.1E-15 | IPR038408 |
| SMART | SM00220 | serkin_6 | 949 | 1232 | 3.4E-32 | IPR000719 |
| SMART | SM00220 | serkin_6 | 344 | 593 | 2.0E-31 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 949 | 1232 | 38.138493 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 658 | 759 | 15.92762 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 46 | 152 | 15.230608 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 158 | 262 | 14.587909 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 766 | 869 | 16.470747 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 344 | 627 | 36.894699 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 465 | 477 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 350 | 372 | - | IPR017441 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 955 | 977 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1070 | 1082 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G70520.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 2. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_009105722.1 | cysteine-rich receptor-like protein kinase 3 [Brassica rapa] | 0 |
| Q9CAL3 | Cysteine-rich receptor-like protein kinase 2 OS=Arabidopsis thaliana OX=3702 GN=CRK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3P6BX68 | (field mustard) hypothetical protein OS=Brassica campestris OX=3711 GN=BRAA07T31258Z PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology