Basic Information
Locus ID:
BniB03g047620.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
BEST Arabidopsis thaliana protein match is
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B3 | 25027091 | 25031742 | - | BniB03g047620.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.51 | 63,467.42 Da | 51.76 | 67.61 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04601 | Domain of unknown function (DUF569) | 233 | 376 | 5.7E-57 | IPR007679 |
| Pfam | PF04601 | Domain of unknown function (DUF569) | 1 | 142 | 4.7E-65 | IPR007679 |
| Pfam | PF04601 | Domain of unknown function (DUF569) | 389 | 521 | 1.3E-63 | IPR007679 |
| SUPERFAMILY | SSF50405 | Actin-crosslinking proteins | 7 | 149 | 1.57E-24 | IPR008999 |
| SUPERFAMILY | SSF50405 | Actin-crosslinking proteins | 236 | 381 | 1.01E-21 | IPR008999 |
| SUPERFAMILY | SSF50405 | Actin-crosslinking proteins | 389 | 525 | 4.32E-23 | IPR008999 |
| Gene3D | G3DSA:2.80.10.50 | - | 382 | 526 | 7.9E-17 | - |
| Gene3D | G3DSA:2.80.10.50 | - | 7 | 147 | 2.3E-14 | - |
| Gene3D | G3DSA:2.80.10.50 | - | 236 | 379 | 1.1E-13 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 545 | 570 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 166 | 216 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 166 | 223 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G69900.1 | Actin cross-linking protein. | 0 |
| RefSeq | XP_023644301.1 | uncharacterized protein LOC17895069 [Capsella rubella] | 0 |
| TrEMBL | A0A8X7W0R9 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_014767 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology