Basic Information
Locus ID:
BniB03g047480.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Belongs to the ubiquitin-conjugating enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B3 | 24939826 | 24941497 | - | BniB03g047480.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.98 | 27,372.33 Da | 56.91 | 74.02 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00195 | UBCc | 99 | 237 | 6.6792E-75 | IPR000608 |
| Pfam | PF00179 | Ubiquitin-conjugating enzyme | 100 | 236 | 1.5E-51 | IPR000608 |
| SUPERFAMILY | SSF54495 | UBC-like | 88 | 242 | 9.44E-63 | IPR016135 |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme | 85 | 243 | 3.8E-66 | IPR016135 |
| SMART | SM00212 | ubc_7 | 99 | 242 | 3.7E-68 | - |
| ProSiteProfiles | PS50127 | Ubiquitin-conjugating (UBC) core domain profile. | 96 | 242 | 60.676563 | IPR000608 |
| ProSitePatterns | PS00183 | Ubiquitin-conjugating (UBC) active site signature. | 169 | 184 | - | IPR023313 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G02760.1 | ubiquiting-conjugating enzyme 2. ubiquitin conjugating enzyme UBC2. Homolog of the yeast RAD6 gene. | 0 |
| RefSeq | XP_018452575.1 | PREDICTED: ubiquitin-conjugating enzyme E2 2-like [Raphanus sativus] | 0 |
| P25866 | Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum OX=4565 GN=UBC2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7W1M2 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_014757 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology