Basic Information
Locus ID:
BniB03g047000.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
ubiE/COQ5 methyltransferase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B3 | 24611720 | 24613039 | + | BniB03g047000.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.01 | 32,922.38 Da | 39.41 | 94.88 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02440 | AdoMet_MTases | 128 | 230 | 7.24365E-16 | - |
| Pfam | PF08241 | Methyltransferase domain | 130 | 229 | 1.9E-20 | IPR013216 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 91 | 271 | 1.08E-32 | IPR029063 |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 94 | 287 | 1.1E-29 | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G69523.1 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein. | 0 |
| RefSeq | XP_018453101.1 | PREDICTED: methyltransferase-like protein 7A isoform X2 [Raphanus sativus] | 0 |
| Q9H8H3 | Thiol S-methyltransferase TMT1A OS=Homo sapiens OX=9606 GN=TMT1A PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7W1Y1 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_014719 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg9326 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_3799 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah013209 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_6g153590 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg42255, Sbi_jg44841 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg27278 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00002128 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl35633, Sgl40971 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000002681, gene:ENSEOMG00000013490 ... |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.6BG0000810 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30027560 |
| Apiaceae | Apium graveolens | 2 | Ag3G01962, Ag5G00773 |
| Arecaceae | Cocos nucifera | 2 | COCNU_05G007610, COCNU_05G007620 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103702896, gene-LOC120108097 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_08.2519.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri13G17633 |
| Brassicaceae | Arabidopsis thaliana | 3 | AT1G69520.1, AT1G69523.1, AT1G69526.2 |
| Brassicaceae | Eutrema salsugineum | 3 | Thhalv10018913m.g.v1.0, Thhalv10019188m.g.v1.0 ... |
| Brassicaceae | Schrenkiella parvula | 4 | Sp5g24610.v2.2, Sp5g24620.v2.2, Sp5g24630.v2.2 ... |
| Brassicaceae | Brassica nigra | 7 | BniB03g041410.2N, BniB03g046890.2N, BniB03g046940.2N ... |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq07G0146 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl07G0136 |
| Cymodoceaceae | Cymodocea nodosa | 2 | gene.Cymno04g10250, gene.Cymno04g10260 |
| Dunaliellaceae | Dunaliella salina | 2 | Dusal.0332s00005.v1.0, Dusal.0332s00009.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 3 | gene.Thate06g08020, gene.Thate06g08030, gene.Thate06g08040 |
| Nitrariaceae | Nitraria sibirica | 2 | evm.TU.LG03.276, evm.TU.LG03.277 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00015199 |
| Plumbaginaceae | Limonium bicolor | 4 | Lb5G27769, Lb5G27770, Lb6G31720, Lb6G31721 |
| Poaceae | Echinochloa crus-galli | 3 | AH07.3454, BH07.3283, CH07.3333 |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_2BG0200900 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.6HG0615420.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_024891 |
| Poaceae | Oryza coarctata | 2 | Oco03G021440, Oco04G022070 |
| Poaceae | Oryza sativa | 1 | LOC_Os02g51030.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_04G276600 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0203337, Pt_Chr0203361 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr09G020330, Chr13G004480 |
| Poaceae | Thinopyrum elongatum | 1 | Tel6E01G550800 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC6AG046350, gene_TRIDC6BG054030 |
| Poaceae | Triticum aestivum | 3 | TraesCS6A02G308000.1, TraesCS6B02G336700.1 ... |
| Poaceae | Zea mays | 2 | Zm00001eb194590_P001, Zm00001eb254460_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-21858 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g17131 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG13.409, evm.TU.LG21.109 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc01g24510 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_17_RagTag.363 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-22944 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-20454 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-14901 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000013l.260 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00006733 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-7174 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-15724 |
| Salicaceae | Populus euphratica | 1 | populus_peu06737 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132607921 |
| Solanaceae | Solanum chilense | 1 | SOLCI001137900 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107021445 |
| Tamaricaceae | Reaumuria soongarica | 2 | STRG.29366_chr10_-, gene_13648 |
| Tamaricaceae | Tamarix chinensis | 2 | TC01G3337, TC03G0727 |
| Zosteraceae | Zostera marina | 1 | Zosma02g17290.v3.1 |