Basic Information
Locus ID:
BniB03g037020.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B3 | 18504469 | 18506588 | - | BniB03g037020.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.68 | 51,572.32 Da | 35.94 | 92.85 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 156 | 422 | 4.86901E-105 | - |
| Pfam | PF00069 | Protein kinase domain | 153 | 419 | 1.4E-46 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 125 | 422 | 3.37E-82 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 130 | 225 | 7.6E-33 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 226 | 438 | 5.8E-64 | - |
| SMART | SM00220 | serkin_6 | 150 | 428 | 1.1E-38 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 150 | 428 | 37.983017 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 272 | 284 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 156 | 178 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 101 | 120 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 103 | 120 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 429 | 467 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 429 | 444 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G01540.2 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_013587354.1 | PREDICTED: probable serine/threonine-protein kinase At1g01540 [Brassica oleracea var. oleracea] | 0 |
| Q3EDL4 | Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana OX=3702 GN=At1g01540 PE=1 SV=2 | 0 | |
| TrEMBL | A0A0D3C6X3 | Protein kinase domain-containing protein OS=Brassica oleracea var. oleracea OX=109376 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology